PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.014G076700.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 97aa    MW: 11012.4 Da    PI: 10.8503
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.014G076700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.9e-213989256
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                        ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  Potri.014G076700.1 39 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 89
                        689******.7*********43...36**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.17E-293996No hitNo description
PROSITE profilePS5103220.5343996IPR001471AP2/ERF domain
SMARTSM003801.6E-313997IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-293996IPR001471AP2/ERF domain
PfamPF008473.9E-163989IPR001471AP2/ERF domain
SuperFamilySSF541716.28E-214096IPR016177DNA-binding domain
PRINTSPR003676.0E-84051IPR001471AP2/ERF domain
PRINTSPR003676.0E-86278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MRGIKTVEKT KYEEPETLRN SPTVTTTKVQ ATKGPTLRRF VGVRQRPSGR WVAEIKDSSQ  60
RVRLWLGTYD TPEEAARAYD EAARALRGEN ARTNFAS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1826738e-75AC182673.2 Populus trichocarpa clone Pop1-26A1, complete sequence.
GenBankAC1834268e-75AC183426.2 Populus trichocarpa clone Pop1-45L17, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002320765.11e-50hypothetical protein POPTR_0014s07280g
SwissprotQ6J9S12e-28RA211_ARATH; Ethylene-responsive transcription factor RAP2-11
TrEMBLB9IC721e-50B9IC72_POPTR; Uncharacterized protein
STRINGPOPTR_0014s07280.14e-50(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-18related to AP2 11